| Achievement | How to unlock | Points
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| - Finish the mission "A Night at Sea".
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| - Kill 20 guards with Mugen's Swordwind.
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- All Bad Things Come From Above
| - Kill 10 guards with a drop attack.
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- An Even Older Trick in the Book
| - Distract 50 guards with Hayato's stone.
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- Clean Hands, Dirty Tricks
| - Kill 10 guards with traps in Hana Gakuen.
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| - Kill or knock out 50 guards.
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| - Kill a guard with a drop attack from a rope.
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| - Travel 1200 meters in water during the mission "The Best Laid Plans".
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| - Kill 30 guards with the help of the environment.
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- Everyone Likes to Pet the Tanuki
| - Distract four guards at the same time with Kuma.
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| - Kill Lady Chiyo without getting a disguise.
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| - Throw a guard into a well.
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| - Execute a plan with all five characters.
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| - Kill or knock out 100 guards.
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- Good Old Rock... Nothing Beats That
| - Kill a samurai with a rock.
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| - Kill at least three guards in the mission "A Night at Sea".
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| - Kill 10 guards with Takuma's Sniper Rifle that are farther than 25 meters away from him.
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| - Kill all enemies at the mansion in Nagoya.
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| - Fail the Shrine riddle at the beginning three times.
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| - Listen to everything Kuma has to say.
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| - Kill 3 Samurai with Yuki.
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| - Use Aiko's disguise 15 times.
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- One Bush to Hide Them All
| - Hide with all characters in a single bush.
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| - Kill or knock out 5 guards at the same time with all 5 characters.
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| - Finish the mission "Red Lights at Matsuyama".
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| - Finish the mission "Reunion at Nagoya".
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| - Come out of the other side of the river in Nagoya.
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| - Kill or knock out 150 guards.
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| - Don't kill anyone with Takuma during the mission "The Best Laid Plans".
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| - Kill a Samurai with a flower pot.
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| - Finish the mission "The Best Laid Plans".
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| - Don't extinguish any light sources in Matsuyama.
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- The Secrets of Hana Gakuen
| - Finish "The Secrets of Hana Gakuen".
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| - Talk to a samurai when disguised with Aiko.
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| - 3 times in one mission, kill two guards at once with Mugen's Swordwind.
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| - Find all hidden caves in Hana Gakuen.
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| - Find the perfect spot for sunbathing.
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| - Kill Lady Chiyo with any character other than Aiko.
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