| Trophy | How to unlock
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| Bazookin' (Bronze) | Kill 6 enemies with the bazooka.
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| Big Blimpin' (Silver) | Kill all penguins stationed on the big zeppelin in Chapter 8 (Single Player).
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| Bird Brained (Gold) | Brainbug at least one penguin from each of the 7 penguin ranks, including Putzki.
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| Brainbug Fever (Bronze) | Brainbug 30 enemies.
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| Dirigibully (Bronze) | Kill all penguins stationed on the small zeppelin in Chapter 8 (Single Player).
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| Dirty Half-Dozen (Gold) | Complete the Cooperative game mode.
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| Disgruntled Worker (Bronze) | Find 3 Signs.
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| Door Sentry (Bronze) | Kill 30 Penguins as they step out of a door.
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| Excessive Stacking (Bronze) | Stack all 3 crates near the end of Chapter 11 (Single Player).
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| Flight Instructor (Bronze) | Juggle an enemy for 10 seconds (Single Player).
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| For What Reason? (Bronze) | Launch the silo missile.
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| Hardboiled Orca (Gold) | Kill 300 penguins or clones.
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| Hardboiled Seal (Bronze) | Kill 100 penguins or clones.
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| High Treason (Bronze) | Brainbug the penguin above the star in Chapter 6 (Single Player).
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| Hindenburger (Bronze) | Kill all penguins stationed on the zeppelin in Chapter 3 (Single Player).
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| Hydrogen Run (Silver) | Escape the large zeppelin with 40 seconds or more on the timer.
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| Laser Assist (Bronze) | Kill an enemy by knocking him into a laser door.
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| Method Acting (Bronze) | Kill yourself as an Elite Penguin on Palace TV in Chapter 13.
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| Mission Complete (Gold) | Overthrow Putzki and liberate Albatropolis.
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| One Shot One Kill (Silver) | Kill 10 enemies, each with one gunshot.
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| Own Medicine (Bronze) | Kill a helicopter penguin with his own missile.
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| Own Pharmacy (Silver) | Kill 6 helicopter penguins with their own missiles.
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| Platinum Trophy (Platinum) | Collect all trophies.
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| Putzki Monologues (Bronze) | Find all four episodes of Putzki on TV in a single playthrough.
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| Rebellious Laborer (Silver) | Find 20 Signs.
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| Revolutionary Fighter (Gold) | Find all 45 Signs.
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| Riding the Thunderbolt (Gold) | Kill Mega-Brno in Hardboiled mode.
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| Too Many Too Soon (Silver) | Kill 3 enemies with one grenade.
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| Turncoat (Bronze) | Kill 20 enemies while brainbugging.
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| Two Birds One Stone (Bronze) | Kill 2 enemies with one grenade.
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